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{
lib,
stdenv,
buildPythonPackage,
fetchFromGitHub,
# build-system
setuptools,
setuptools-scm,
# dependencies
astropy,
casa-formats-io,
dask,
joblib,
numpy,
packaging,
radio-beam,
tqdm,
# tests
aplpy,
pytest-astropy,
pytestCheckHook,
}:
buildPythonPackage rec {
pname = "spectral-cube";
version = "0.6.7";
pyproject = true;
src = fetchFromGitHub {
owner = "radio-astro-tools";
repo = "spectral-cube";
tag = "v${version}";
hash = "sha256-l5r7oeWr/JrmGOmUo4po2VlGldh8y7E3ufd+Gw1/JmM=";
};
build-system = [
setuptools
setuptools-scm
];
dependencies = [
astropy
casa-formats-io
dask
joblib
numpy
packaging
radio-beam
tqdm
]
++ dask.optional-dependencies.array;
nativeCheckInputs = [
aplpy
pytest-astropy
pytestCheckHook
];
# Tests must be run in the build directory.
preCheck = ''
cd build/lib
'';
disabledTests = lib.optionals stdenv.hostPlatform.isDarwin [
# Flaky: AssertionError: assert diffvals.max()*u.B <= 1*u.MB
"test_reproject_3D_memory"
];
disabledTestPaths = lib.optionals stdenv.hostPlatform.isDarwin [
# On x86_darwin, this test fails with "Fatal Python error: Aborted"
# when sandbox = true.
"spectral_cube/tests/test_visualization.py"
];
pythonImportsCheck = [ "spectral_cube" ];
meta = {
description = "Library for reading and analyzing astrophysical spectral data cubes";
homepage = "https://spectral-cube.readthedocs.io";
changelog = "https://github.com/radio-astro-tools/spectral-cube/releases/tag/v${version}";
license = lib.licenses.bsd3;
maintainers = with lib.maintainers; [ smaret ];
};
}
|
