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{
lib,
fetchurl,
fetchFromGitHub,
buildPythonPackage,
python,
# build-system
setuptools,
# dependencies
otb,
# tests
pytestCheckHook,
pytest-cov-stub,
requests,
writableTmpDirAsHomeHook,
}:
let
# fetch the test data separately or else none of the test will work
# https://github.com/orfeotoolbox/pyotb/blob/develop/tests/tests_data.py
spotImage = fetchurl {
url = "https://gitlab.orfeo-toolbox.org/orfeotoolbox/otb/-/raw/develop/Data/Input/SP67_FR_subset_1.tif";
sha256 = "sha256-MuWY/g7KI+F23lFY/+AX5MLWJlIgHCr5BvFjDHzpWgY=";
};
pleiadesImage = fetchurl {
url = "https://gitlab.orfeo-toolbox.org/orfeotoolbox/otb/-/raw/develop/Data/Baseline/OTB/Images/prTvOrthoRectification_pleiades-1_noDEM.tif";
sha256 = "sha256-1EsGAJdHgBIb/gfbh4Y7yEEmYHb54bSx4fEMKssZ/oA=";
};
otbWithPy = otb.override {
enablePython = true;
python3 = python;
};
in
buildPythonPackage rec {
pname = "pyotb";
version = "2.1.0";
pyproject = true;
src = fetchFromGitHub {
owner = "orfeotoolbox";
repo = "pyotb";
tag = version;
hash = "sha256-KomIMVx4jfsTSbGtoml9ON/82sHanOkp/mp1TiUaa2E=";
};
postPatch = ''
substituteInPlace pyotb/helpers.py \
--replace-fail 'OTB_ROOT = os.environ.get("OTB_ROOT")' 'OTB_ROOT = "${otbWithPy}"' \
--replace-fail 'os.environ["GDAL_DATA"] = gdal_data' "" \
--replace-fail 'os.environ["PROJ_LIB"] = proj_lib' "" \
--replace-fail 'os.environ["GDAL_DRIVER_PATH"] = "disable"' ""
ln -s ${spotImage} $HOME/SP67_FR_subset_1.tif
ln -s ${pleiadesImage} $HOME/prTvOrthoRectification_pleiades-1_noDEM.tif
substituteInPlace tests/tests_data.py \
--replace-fail \
'SPOT_IMG_URL = "https://gitlab.orfeo-toolbox.org/orfeotoolbox/otb/-/raw/develop/Data/Input/SP67_FR_subset_1.tif"' \
"SPOT_IMG_URL = '$HOME/SP67_FR_subset_1.tif'" \
--replace-fail \
'PLEIADES_IMG_URL = "https://gitlab.orfeo-toolbox.org/orfeotoolbox/otb/-/raw/develop/Data/Baseline/OTB/Images/prTvOrthoRectification_pleiades-1_noDEM.tif"' \
"PLEIADES_IMG_URL = '$HOME/prTvOrthoRectification_pleiades-1_noDEM.tif'"
'';
build-system = [
setuptools
];
dependencies = [ otbWithPy ];
pythonImportsCheck = [ "pyotb" ];
nativeCheckInputs = [
pytestCheckHook
pytest-cov-stub
requests
writableTmpDirAsHomeHook
];
disabledTests = [
# test requires network access as inputs needs to be url
"test_app_input_vsi"
"test_img_metadata"
"test_summarize_pipeline_simple"
"test_summarize_pipeline_diamond"
"test_summarize_strip_output"
];
meta = {
description = "Python extension of Orfeo Toolbox";
homepage = "https://github.com/orfeotoolbox/pyotb";
changelog = "https://github.com/orfeotoolbox/pyotb/releases/tag/${version}";
license = lib.licenses.asl20;
teams = [ lib.teams.geospatial ];
maintainers = with lib.maintainers; [ daspk04 ];
};
}
|
