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{
lib,
buildPythonPackage,
fetchFromGitHub,
# build-system
setuptools,
# dependencies
autograd,
future,
numba,
numpy,
pandas,
patsy,
scikit-learn,
scipy,
statsmodels,
# tests
matplotlib,
pytest-xdist,
pytestCheckHook,
seaborn,
}:
buildPythonPackage rec {
pname = "hyppo";
version = "0.5.2";
pyproject = true;
src = fetchFromGitHub {
owner = "neurodata";
repo = "hyppo";
tag = "v${version}";
hash = "sha256-7Y+UhneIGwqjsPCnGAQWF/l4r1gFbYs3fdHhV46ZBjA=";
};
# some of the doctests (4/21) are broken, e.g. unbound variables, nondeterministic with insufficient tolerance, etc.
# (note upstream's .circleci/config.yml only tests test_*.py files despite their pytest.ini adding --doctest-modules)
postPatch = ''
substituteInPlace pytest.ini --replace-fail "addopts = --doctest-modules" ""
'';
build-system = [ setuptools ];
dependencies = [
autograd
future
numba
numpy
pandas
patsy
scikit-learn
scipy
statsmodels
];
nativeCheckInputs = [
pytest-xdist
pytestCheckHook
matplotlib
seaborn
];
enabledTestPaths = [
"hyppo"
];
meta = {
homepage = "https://github.com/neurodata/hyppo";
description = "Python package for multivariate hypothesis testing";
changelog = "https://github.com/neurodata/hyppo/releases/tag/v${version}";
license = lib.licenses.mit;
maintainers = with lib.maintainers; [ bcdarwin ];
};
}
|
