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|
{
lib,
newScope,
stdenv,
buildPythonPackage,
fetchFromGitHub,
python,
# build-system
setuptools,
cython,
pybind11,
# dependencies
decorator,
cachetools,
mpi4py,
fenics-ufl,
firedrake-fiat,
h5py,
libsupermesh,
loopy,
petsc4py,
petsctools,
numpy,
packaging,
pkgconfig,
progress,
pyadjoint-ad,
pycparser,
pytools,
requests,
rtree,
scipy,
sympy,
islpy,
vtk,
matplotlib,
immutabledict,
# tests
pytest,
mpi-pytest,
mpiCheckPhaseHook,
writableTmpDirAsHomeHook,
# passthru
firedrake,
mpich,
nix-update-script,
}:
let
firedrakePackages = lib.makeScope newScope (self: {
inherit (petsc4py.petscPackages) mpi hdf5;
mpi4py = self.callPackage mpi4py.override { };
h5py = self.callPackage h5py.override { };
mpi-pytest = self.callPackage mpi-pytest.override { };
});
in
buildPythonPackage (finalAttrs: {
pname = "firedrake";
version = "2025.10.2";
pyproject = true;
src = fetchFromGitHub {
owner = "firedrakeproject";
repo = "firedrake";
tag = finalAttrs.version;
hash = "sha256-A0dr9A1fm74IzpYiVxzdo4jtELYH7JBeRMOD9uYJODQ=";
};
# relax build-dependency petsc4py
postPatch = ''
substituteInPlace pyproject.toml --replace-fail \
"petsc4py==3.24.0" "petsc4py"
'';
pythonRelaxDeps = [
"decorator"
];
build-system = [
cython
libsupermesh
firedrakePackages.mpi4py
numpy
pkgconfig
pybind11
setuptools
petsc4py
rtree
];
nativeBuildInputs = [
firedrakePackages.mpi
];
dependencies = [
decorator
cachetools
firedrakePackages.mpi4py
fenics-ufl
firedrake-fiat
firedrakePackages.h5py
immutabledict
libsupermesh
loopy
petsc4py
petsctools
numpy
packaging
pkgconfig
progress
pyadjoint-ad
pycparser
pytools
requests
rtree
scipy
sympy
# vtk optional required by IO module, we can make it a hard dependency in nixpkgs,
# see https://github.com/firedrakeproject/firedrake/pull/4713
vtk
# required by script spydump
matplotlib
]
++ lib.optionals stdenv.hostPlatform.isDarwin [
islpy
];
postFixup = lib.optionalString stdenv.hostPlatform.isDarwin ''
install_name_tool -add_rpath ${libsupermesh}/${python.sitePackages}/libsupermesh/lib \
$out/${python.sitePackages}/firedrake/cython/supermeshimpl.cpython-*-darwin.so
'';
doCheck = true;
__darwinAllowLocalNetworking = true;
pythonImportsCheck = [ "firedrake" ];
nativeCheckInputs = [
pytest
firedrakePackages.mpi-pytest
mpiCheckPhaseHook
writableTmpDirAsHomeHook
];
# run official smoke tests
checkPhase = ''
runHook preCheck
$out/bin/firedrake-check
runHook postCheck
'';
passthru = {
# python updater script sets the wrong tag
skipBulkUpdate = true;
updateScript = nix-update-script {
extraArgs = [
"--version-regex"
"([0-9.]+)"
];
};
tests = lib.optionalAttrs stdenv.hostPlatform.isLinux {
mpich = firedrake.override {
petsc4py = petsc4py.override { mpi = mpich; };
};
};
};
meta = {
homepage = "https://www.firedrakeproject.org";
downloadPage = "https://github.com/firedrakeproject/firedrake";
description = "Automated Finite Element System";
license = with lib.licenses; [
bsd3
lgpl3Plus
];
maintainers = with lib.maintainers; [ qbisi ];
};
})
|
