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{
lib,
buildPythonPackage,
fetchFromGitHub,
meson-python,
packaging,
cython,
numpy,
scipy,
h5py,
nibabel,
tqdm,
trx-python,
}:
buildPythonPackage rec {
pname = "dipy";
version = "1.11.0";
pyproject = true;
src = fetchFromGitHub {
owner = "dipy";
repo = "dipy";
tag = version;
hash = "sha256-vqjd5gd9B630pv6H4MvXnlPwlEhm1o7MbwYD0J7D24o=";
};
build-system = [
cython
meson-python
numpy
packaging
];
dependencies = [
numpy
scipy
h5py
nibabel
packaging
tqdm
trx-python
];
# disable tests for now due to:
# - some tests require data download (see dipy/dipy/issues/2092);
# - running the tests manually causes a multiprocessing hang;
# - import weirdness when running the tests
doCheck = false;
pythonImportsCheck = [
"dipy"
"dipy.core"
"dipy.direction"
"dipy.tracking"
"dipy.reconst"
"dipy.io"
"dipy.viz"
"dipy.data"
"dipy.utils"
"dipy.segment"
"dipy.sims"
"dipy.stats"
"dipy.denoise"
"dipy.workflows"
"dipy.nn"
];
meta = {
homepage = "https://dipy.org/";
description = "Diffusion imaging toolkit for Python";
changelog = "https://github.com/dipy/dipy/blob/${version}/Changelog";
license = lib.licenses.bsd3;
maintainers = with lib.maintainers; [ bcdarwin ];
};
}
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