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{
lib,
buildPythonPackage,
fetchFromGitHub,
setuptools,
pytestCheckHook,
future,
numpy,
pillow,
scipy,
scikit-learn,
scikit-image,
threadpoolctl,
}:
buildPythonPackage rec {
pname = "batchgenerators";
version = "0.25";
pyproject = true;
src = fetchFromGitHub {
owner = "MIC-DKFZ";
repo = "batchgenerators";
rev = "v${version}";
hash = "sha256-L2mWH2t8PN9o1M67KDdl1Tj2ZZ02MY4icsJY2VNrj3A=";
};
build-system = [ setuptools ];
dependencies = [
future
numpy
pillow
scipy
scikit-learn
scikit-image
threadpoolctl
];
# see https://github.com/MIC-DKFZ/batchgenerators/pull/78
pythonRemoveDeps = [ "unittest2" ];
nativeCheckInputs = [ pytestCheckHook ];
# see https://github.com/MIC-DKFZ/batchgenerators/pull/78
disabledTestPaths = [ "tests/test_axis_mirroring.py" ];
pythonImportsCheck = [
"batchgenerators"
"batchgenerators.augmentations"
"batchgenerators.dataloading"
"batchgenerators.datasets"
"batchgenerators.transforms"
"batchgenerators.utilities"
];
meta = {
description = "2D and 3D image data augmentation for deep learning";
homepage = "https://github.com/MIC-DKFZ/batchgenerators";
license = lib.licenses.asl20;
maintainers = with lib.maintainers; [ bcdarwin ];
};
}
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