diff options
Diffstat (limited to 'pkgs/development/python-modules')
44 files changed, 1749 insertions, 85 deletions
diff --git a/pkgs/development/python-modules/aioecowitt/default.nix b/pkgs/development/python-modules/aioecowitt/default.nix index 4a5abb7fe94e..6d7600a1c7b6 100644 --- a/pkgs/development/python-modules/aioecowitt/default.nix +++ b/pkgs/development/python-modules/aioecowitt/default.nix @@ -10,7 +10,7 @@ buildPythonPackage rec { pname = "aioecowitt"; - version = "2023.01.0"; + version = "2023.5.0"; format = "setuptools"; disabled = pythonOlder "3.9"; @@ -19,7 +19,7 @@ buildPythonPackage rec { owner = "home-assistant-libs"; repo = pname; rev = "refs/tags/${version}"; - hash = "sha256-xOoKrGBkMEdpeiU1r27xlZp5s5sGJzvD7Ats+w6KR/o="; + hash = "sha256-uEA3OA/QOQ/h6ZMnb5hGQXHyqNO+KLmDSZMQBvmRwtE="; }; propagatedBuildInputs = [ diff --git a/pkgs/development/python-modules/aioesphomeapi/default.nix b/pkgs/development/python-modules/aioesphomeapi/default.nix index cccf249b1f7a..e910b9b3618b 100644 --- a/pkgs/development/python-modules/aioesphomeapi/default.nix +++ b/pkgs/development/python-modules/aioesphomeapi/default.nix @@ -13,7 +13,7 @@ buildPythonPackage rec { pname = "aioesphomeapi"; - version = "13.7.4"; + version = "13.7.5"; format = "setuptools"; disabled = pythonOlder "3.9"; @@ -22,7 +22,7 @@ buildPythonPackage rec { owner = "esphome"; repo = pname; rev = "refs/tags/v${version}"; - hash = "sha256-licFBWT6CBYHgzVj2dza5gusjapABJWgsfHO/HJafnA="; + hash = "sha256-HBBhKRY3nfZ8TaQeXXlvowWqHt/vrwXD9PUb1cLvHLo="; }; propagatedBuildInputs = [ diff --git a/pkgs/development/python-modules/aionotion/default.nix b/pkgs/development/python-modules/aionotion/default.nix index ad0729c0ffa7..04f08687da35 100644 --- a/pkgs/development/python-modules/aionotion/default.nix +++ b/pkgs/development/python-modules/aionotion/default.nix @@ -14,7 +14,7 @@ buildPythonPackage rec { pname = "aionotion"; - version = "2023.05.1"; + version = "2023.05.4"; format = "pyproject"; disabled = pythonOlder "3.7"; @@ -23,7 +23,7 @@ buildPythonPackage rec { owner = "bachya"; repo = pname; rev = version; - hash = "sha256-gCHJBgPWe5aSzTvvETjfn3zoEuuCJV1s4lMQLP72a/8="; + hash = "sha256-iQQbLMb3Bi+BzKeN5oEHWjCJryf+TUiINueqStGyktQ="; }; nativeBuildInputs = [ diff --git a/pkgs/development/python-modules/aplpy/default.nix b/pkgs/development/python-modules/aplpy/default.nix index 6254a902eeab..ac00576cc297 100644 --- a/pkgs/development/python-modules/aplpy/default.nix +++ b/pkgs/development/python-modules/aplpy/default.nix @@ -14,7 +14,7 @@ , pytestCheckHook , pythonOlder , reproject -, scikitimage +, scikit-image , shapely }: @@ -44,7 +44,7 @@ buildPythonPackage rec { pyavm pyregion reproject - scikitimage + scikit-image shapely ]; diff --git a/pkgs/development/python-modules/batchgenerators/default.nix b/pkgs/development/python-modules/batchgenerators/default.nix index 9e0c81570445..a20598b61d01 100644 --- a/pkgs/development/python-modules/batchgenerators/default.nix +++ b/pkgs/development/python-modules/batchgenerators/default.nix @@ -9,7 +9,7 @@ , fetchpatch , scipy , scikit-learn -, scikitimage +, scikit-image , threadpoolctl }: @@ -33,7 +33,7 @@ buildPythonPackage rec { pillow scipy scikit-learn - scikitimage + scikit-image threadpoolctl ]; diff --git a/pkgs/development/python-modules/bellows/default.nix b/pkgs/development/python-modules/bellows/default.nix index 00cc61a3092e..5112d9d46167 100644 --- a/pkgs/development/python-modules/bellows/default.nix +++ b/pkgs/development/python-modules/bellows/default.nix @@ -15,7 +15,7 @@ buildPythonPackage rec { pname = "bellows"; - version = "0.35.2"; + version = "0.35.5"; format = "setuptools"; disabled = pythonOlder "3.8"; @@ -24,7 +24,7 @@ buildPythonPackage rec { owner = "zigpy"; repo = "bellows"; rev = "refs/tags/${version}"; - hash = "sha256-I9PXFdRXHQ7OnzCdB631nlfnkpConl+j5Z3iiH7RcA4="; + hash = "sha256-JpRL4RxVcH+hzz7YTlRw+FHH95RavS/m1HWyBiLLWME="; }; propagatedBuildInputs = [ diff --git a/pkgs/development/python-modules/boxx/default.nix b/pkgs/development/python-modules/boxx/default.nix index cb1ef6a35ea2..75bd3c2e561b 100644 --- a/pkgs/development/python-modules/boxx/default.nix +++ b/pkgs/development/python-modules/boxx/default.nix @@ -4,7 +4,7 @@ , python , xvfb-run , matplotlib -, scikitimage +, scikit-image , numpy , pandas , imageio @@ -31,7 +31,7 @@ buildPythonPackage rec { propagatedBuildInputs = [ matplotlib - scikitimage + scikit-image numpy pandas imageio diff --git a/pkgs/development/python-modules/bsuite/default.nix b/pkgs/development/python-modules/bsuite/default.nix index 0a5f22511120..e039bf0fa07f 100644 --- a/pkgs/development/python-modules/bsuite/default.nix +++ b/pkgs/development/python-modules/bsuite/default.nix @@ -10,7 +10,7 @@ , absl-py , dm-env , plotnine -, scikitimage +, scikit-image , dm-tree , patsy , tensorflow-probability @@ -45,7 +45,7 @@ let bsuite = buildPythonPackage rec { pandas patsy plotnine - scikitimage + scikit-image scipy statsmodels termcolor diff --git a/pkgs/development/python-modules/bx-py-utils/default.nix b/pkgs/development/python-modules/bx-py-utils/default.nix index f408903a0a13..c2db1cd1108f 100644 --- a/pkgs/development/python-modules/bx-py-utils/default.nix +++ b/pkgs/development/python-modules/bx-py-utils/default.nix @@ -60,6 +60,12 @@ buildPythonPackage rec { requests-mock ]; + disabledTests = [ + # too closely affected by bs4 updates + "test_pretty_format_html" + "test_assert_html_snapshot_by_css_selector" + ]; + disabledTestPaths = [ "bx_py_utils_tests/tests/test_project_setup.py" ]; diff --git a/pkgs/development/python-modules/cheetah3/default.nix b/pkgs/development/python-modules/cheetah3/default.nix index 01a6948e3cac..c01b42c64b83 100644 --- a/pkgs/development/python-modules/cheetah3/default.nix +++ b/pkgs/development/python-modules/cheetah3/default.nix @@ -1,19 +1,33 @@ -{ lib, buildPythonPackage, fetchPypi }: +{ lib +, buildPythonPackage +, fetchFromGitHub +, pythonOlder +}: buildPythonPackage rec { - pname = "Cheetah3"; - version = "3.2.6.post2"; + pname = "cheetah3"; + version = "3.3.1"; + format = "setuptools"; - src = fetchPypi { - inherit pname version; - sha256 = "63157d7a00a273b59676b5be5aa817c75c37efc88478231f1a160f4cfb7f7878"; + disabled = pythonOlder "3.7"; + + src = fetchFromGitHub { + owner = "CheetahTemplate3"; + repo = pname; + rev = "refs/tags/${version}"; + hash = "sha256-op8CwYISD2Gfsh0Olr8H07yvaT1maKyizb/IN9ZHwmQ="; }; doCheck = false; # Circular dependency + pythonImportsCheck = [ + "Cheetah" + ]; + meta = with lib; { - homepage = "http://www.cheetahtemplate.org/"; description = "A template engine and code generation tool"; + homepage = "http://www.cheetahtemplate.org/"; + changelog = "https://github.com/CheetahTemplate3/cheetah3/releases/tag/${version}"; license = licenses.mit; maintainers = with maintainers; [ pjjw ]; }; diff --git a/pkgs/development/python-modules/ciscoconfparse/default.nix b/pkgs/development/python-modules/ciscoconfparse/default.nix index 803cfb7b6fa0..83035774d05a 100644 --- 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${./Cargo.lock} Cargo.lock + ''; + name = "${pname}-${version}"; + hash = "sha256-S8ebg5sMK7zoG84eAeXIWqDYuRVW9Mx9GJUAaKD9mxw="; + }; + + nativeBuildInputs = [ + rustPlatform.cargoSetupHook + rustPlatform.maturinBuildHook + ]; + + buildInputs = lib.optionals stdenv.isDarwin [ + libiconv + Security + ]; + + pythonImportsCheck = [ + "css_inline" + ]; + + nativeCheckInputs = [ + hypothesis + pytestCheckHook + ]; + + meta = with lib; { + description = "Inline CSS into style attributes"; + homepage = "https://github.com/Stranger6667/css-inline"; + changelog = "https://github.com/Stranger6667/css-inline/blob/${src.rev}/CHANGELOG.md"; + license = licenses.mit; + maintainers = with maintainers; [ hexa ]; + }; +} diff --git a/pkgs/development/python-modules/dask-image/default.nix b/pkgs/development/python-modules/dask-image/default.nix index b658a6e8dbe7..3ae2278298a7 100644 --- a/pkgs/development/python-modules/dask-image/default.nix +++ b/pkgs/development/python-modules/dask-image/default.nix @@ -7,7 +7,7 @@ , pims , pytestCheckHook , pythonOlder -, scikitimage +, scikit-image , scipy }: @@ -32,7 +32,7 @@ buildPythonPackage rec { nativeCheckInputs = [ pytestCheckHook - scikitimage + scikit-image ]; postPatch = '' diff --git a/pkgs/development/python-modules/dj-static/default.nix b/pkgs/development/python-modules/dj-static/default.nix new file mode 100644 index 000000000000..167fbf88bd51 --- /dev/null +++ b/pkgs/development/python-modules/dj-static/default.nix @@ -0,0 +1,40 @@ +{ lib +, buildPythonPackage +, fetchFromGitHub +, django +, static3 +}: + +buildPythonPackage rec { + pname = "dj-static"; + version = "0.0.6"; + format = "setuptools"; + + src = fetchFromGitHub { + owner = "heroku-python"; + repo = "dj-static"; + rev = "v${version}"; + hash = "sha256-B6TydlezbDkmfFgJjdFniZIYo/JjzPvFj43co+HYCdc="; + }; + + buildInputs = [ + django + ]; + + propagatedBuildInputs = [ + static3 + ]; + + pythonImportsCheck = [ + "dj_static" + ]; + + doCheck = false; + + meta = with lib; { + description = "Serve production static files with Django"; + homepage = "https://github.com/heroku-python/dj-static"; + license = licenses.bsd2; + maintainers = with maintainers; [ hexa ]; + }; +} diff --git a/pkgs/development/python-modules/django-localflavor/default.nix b/pkgs/development/python-modules/django-localflavor/default.nix new file mode 100644 index 000000000000..5f63532ad96e --- /dev/null +++ b/pkgs/development/python-modules/django-localflavor/default.nix @@ -0,0 +1,60 @@ +{ lib +, buildPythonPackage +, fetchFromGitHub + +# bring your own +, django + +# propagates +, python-stdnum + +# tests +, pytest-django +, pytestCheckHook +}: + +buildPythonPackage rec { + pname = "django-localflavor"; + version = "4.0"; + format = "setuptools"; + + src = fetchFromGitHub { + owner = "django"; + repo = "django-localflavor"; + rev = "refs/tags/${version}"; + hash = "sha256-UWp3ei1VlEsEfjbJIE+MpffSzYF4X1HEQw+z+5kZoP0="; + }; + + buildInputs = [ + django + ]; + + propagatedBuildInputs = [ + python-stdnum + ]; + + pythonImportsCheck = [ + # samples + "localflavor.ar" + "localflavor.de" + "localflavor.fr" + "localflavor.my" + "localflavor.nl" + "localflavor.us" + "localflavor.za" + ]; + + checkInputs = [ + pytest-django + pytestCheckHook + ]; + + DJANGO_SETTINGS_MODULE = "tests.settings"; + + meta = with lib; { + description = "Country-specific Django helpers"; + homepage = "https://github.com/django/django-localflavor"; + license = licenses.bsd3; + maintainers = with maintainers; [ hexa ]; + }; +} diff --git a/pkgs/development/python-modules/django-rq/default.nix b/pkgs/development/python-modules/django-rq/default.nix index 5444700999fa..e5b9c164b1ef 100644 --- a/pkgs/development/python-modules/django-rq/default.nix +++ b/pkgs/development/python-modules/django-rq/default.nix @@ -10,7 +10,7 @@ buildPythonPackage rec { pname = "django-rq"; - version = "2.8.0"; + version = "2.8.1"; format = "setuptools"; disabled = isPy27; @@ -18,7 +18,7 @@ buildPythonPackage rec { owner = "rq"; repo = pname; rev = "refs/tags/v${version}"; - hash = "sha256-UiV9eshlUqzmoI+04BXMFVI8pm7OYQZFa9lmIQrmlRg="; + hash = "sha256-Rabw6FIoSg9Cj4+tRO3BmBAeo9yr8KwU5xTPFL0JkOs="; }; propagatedBuildInputs = [ diff --git a/pkgs/development/python-modules/dm-haiku/tests.nix b/pkgs/development/python-modules/dm-haiku/tests.nix index a951323e5d89..208fb14e76be 100644 --- a/pkgs/development/python-modules/dm-haiku/tests.nix +++ b/pkgs/development/python-modules/dm-haiku/tests.nix @@ -12,7 +12,7 @@ , bsuite , frozendict , dm-env -, scikitimage +, scikit-image , rlax , distrax , tensorflow-probability @@ -42,7 +42,7 @@ buildPythonPackage rec { pytestCheckHook optax rlax - scikitimage + scikit-image tensorflow tensorflow-probability ]; diff --git a/pkgs/development/python-modules/dvc-render/default.nix b/pkgs/development/python-modules/dvc-render/default.nix index efbb810275fe..3bdc1bd23cee 100644 --- a/pkgs/development/python-modules/dvc-render/default.nix +++ b/pkgs/development/python-modules/dvc-render/default.nix @@ -2,6 +2,7 @@ , stdenv , buildPythonPackage , fetchFromGitHub +, flatten-dict , funcy , matplotlib , tabulate @@ -14,7 +15,7 @@ buildPythonPackage rec { pname = "dvc-render"; - version = "0.4.0"; + version = "0.5.0"; format = "pyproject"; disabled = pythonOlder "3.7"; @@ -23,7 +24,7 @@ buildPythonPackage rec { owner = "iterative"; repo = pname; rev = "refs/tags/${version}"; - hash = "sha256-bt2jqjhgtGmJsyfYNSzETQZUHFKni/poyeqpQzIJX08="; + hash = "sha256-x9vb8X7p4MOMZwr91ronXB/bPZD3PqYhbzLccRewyco="; }; SETUPTOOLS_SCM_PRETEND_VERSION = version; @@ -34,6 +35,7 @@ buildPythonPackage rec { passthru.optional-dependencies = { table = [ + flatten-dict tabulate ]; markdown = [ diff --git a/pkgs/development/python-modules/dvclive/default.nix b/pkgs/development/python-modules/dvclive/default.nix index ff88e758f6ca..5734ccee09b0 100644 --- a/pkgs/development/python-modules/dvclive/default.nix +++ b/pkgs/development/python-modules/dvclive/default.nix @@ -14,7 +14,7 @@ buildPythonPackage rec { pname = "dvclive"; - version = "2.8.1"; + version = "2.9.0"; format = "pyproject"; disabled = pythonOlder "3.8"; @@ -23,7 +23,7 @@ buildPythonPackage rec { owner = "iterative"; repo = pname; rev = "refs/tags/${version}"; - hash = "sha256-Wb0347y+oDFOctKjJUYPtqIFdsRm2wt16ZlQWDgjr7g="; + hash = "sha256-CP3PfRarlByVTchqYZKMuTaVKupqKOZDEOkzuVViW0Q="; }; SETUPTOOLS_SCM_PRETEND_VERSION = version; diff --git a/pkgs/development/python-modules/easyocr/default.nix b/pkgs/development/python-modules/easyocr/default.nix index 2a5e82cc8e23..c94a0647ba40 100644 --- a/pkgs/development/python-modules/easyocr/default.nix +++ b/pkgs/development/python-modules/easyocr/default.nix @@ -9,7 +9,7 @@ , pyclipper , python-bidi , torch -, scikitimage +, scikit-image , scipy , shapely , torchvision @@ -34,7 +34,7 @@ buildPythonPackage rec { ''; propagatedBuildInputs = [ - scikitimage + scikit-image hdf5 python-bidi numpy diff --git a/pkgs/development/python-modules/glymur/default.nix b/pkgs/development/python-modules/glymur/default.nix index ed19595cc6bb..7774b3c53804 100644 --- a/pkgs/development/python-modules/glymur/default.nix +++ b/pkgs/development/python-modules/glymur/default.nix @@ -7,7 +7,7 @@ , openjpeg , pytestCheckHook , pythonOlder -, scikitimage +, scikit-image , setuptools }: @@ -36,7 +36,7 @@ buildPythonPackage rec { nativeCheckInputs = [ lxml pytestCheckHook - scikitimage + scikit-image ]; postConfigure = '' diff --git a/pkgs/development/python-modules/hahomematic/default.nix b/pkgs/development/python-modules/hahomematic/default.nix index d7a545bcb592..eb1c3bf7e367 100644 --- a/pkgs/development/python-modules/hahomematic/default.nix +++ b/pkgs/development/python-modules/hahomematic/default.nix @@ -16,7 +16,7 @@ buildPythonPackage rec { pname = "hahomematic"; - version = "2023.5.1"; + version = "2023.5.2"; format = "pyproject"; disabled = pythonOlder "3.9"; @@ -25,7 +25,7 @@ buildPythonPackage rec { owner = "danielperna84"; repo = pname; rev = "refs/tags/${version}"; - hash = "sha256-YsvsT1TKAlMGS9F3zDuruXnC/COFbR5ApPFzh+hzQyE="; + hash = "sha256-4P4ACoXapx1FzUWGCFu8U4iBTG0fUjLTlJXF2HzKyQg="; }; nativeBuildInputs = [ diff --git a/pkgs/development/python-modules/image-match/default.nix b/pkgs/development/python-modules/image-match/default.nix index a59f7e08b988..799f7888cfb2 100644 --- a/pkgs/development/python-modules/image-match/default.nix +++ b/pkgs/development/python-modules/image-match/default.nix @@ -1,4 +1,4 @@ -{ lib, buildPythonPackage, fetchFromGitHub, pytest-runner, scikitimage }: +{ lib, buildPythonPackage, fetchFromGitHub, pytest-runner, scikit-image }: buildPythonPackage { pname = "image-match"; @@ -14,7 +14,7 @@ buildPythonPackage { buildInputs = [ pytest-runner ]; propagatedBuildInputs = [ - scikitimage + scikit-image ]; # remove elasticsearch requirement due to version incompatibility diff --git a/pkgs/development/python-modules/imagecorruptions/default.nix b/pkgs/development/python-modules/imagecorruptions/default.nix index ee1df820a401..f3450d7df17d 100644 --- a/pkgs/development/python-modules/imagecorruptions/default.nix +++ b/pkgs/development/python-modules/imagecorruptions/default.nix @@ -1,7 +1,7 @@ { buildPythonPackage , fetchPypi , numpy -, scikitimage +, scikit-image , lib , opencv3 }: @@ -22,7 +22,7 @@ buildPythonPackage rec { propagatedBuildInputs = [ numpy - scikitimage + scikit-image opencv3 ]; diff --git a/pkgs/development/python-modules/imgaug/default.nix b/pkgs/development/python-modules/imgaug/default.nix index 1f91e41345e5..c67f7fa5b949 100644 --- a/pkgs/development/python-modules/imgaug/default.nix +++ b/pkgs/development/python-modules/imgaug/default.nix @@ -5,7 +5,7 @@ , numpy , opencv3 , pytestCheckHook -, scikitimage +, scikit-image , scipy , shapely , six @@ -37,7 +37,7 @@ buildPythonPackage rec { imagecorruptions numpy opencv3 - scikitimage + scikit-image scipy shapely six @@ -79,6 +79,6 @@ buildPythonPackage rec { platforms = platforms.linux; # Scikit-image 0.19 update broke API, see https://github.com/scikit-image/scikit-image/releases/tag/v0.19.0 # and https://github.com/scikit-image/scikit-image/issues/6093 - broken = lib.versionAtLeast scikitimage.version "0.19"; + broken = lib.versionAtLeast scikit-image.version "0.19"; }; } diff --git a/pkgs/development/python-modules/intensity-normalization/default.nix b/pkgs/development/python-modules/intensity-normalization/default.nix index 4f4692dbfad4..f784dc067953 100644 --- a/pkgs/development/python-modules/intensity-normalization/default.nix +++ b/pkgs/development/python-modules/intensity-normalization/default.nix @@ -10,7 +10,7 @@ , pydicom , pymedio , scikit-fuzzy -, scikitimage +, scikit-image , scikit-learn , scipy , simpleitk @@ -45,7 +45,7 @@ buildPythonPackage rec { pydicom pymedio scikit-fuzzy - scikitimage + scikit-image scikit-learn scipy simpleitk diff --git a/pkgs/development/python-modules/losant-rest/default.nix b/pkgs/development/python-modules/losant-rest/default.nix index b36221f15813..3ac79c8341c3 100644 --- a/pkgs/development/python-modules/losant-rest/default.nix +++ b/pkgs/development/python-modules/losant-rest/default.nix @@ -9,7 +9,7 @@ buildPythonPackage rec { pname = "losant-rest"; - version = "1.17.3"; + version = "1.17.4"; format = "setuptools"; disabled = pythonOlder "3.7"; @@ -18,7 +18,7 @@ buildPythonPackage rec { owner = "Losant"; repo = "losant-rest-python"; rev = "v${version}"; - hash = "sha256-S4ypZ4yTncoyKi4INpXg0UtcD+CmKRwr3c/FuSoXVKs="; + hash = "sha256-/7k2IYoP4z9ub89wNzDfzyA520CNzn3L68yMWgApz34="; }; propagatedBuildInputs = [ diff --git a/pkgs/development/python-modules/mask-rcnn/default.nix b/pkgs/development/python-modules/mask-rcnn/default.nix index 337e7d27533c..471b1fa61d42 100644 --- a/pkgs/development/python-modules/mask-rcnn/default.nix +++ b/pkgs/development/python-modules/mask-rcnn/default.nix @@ -11,7 +11,7 @@ , numpy , opencv3 , pillow -, scikitimage +, scikit-image , scipy , tensorflow }: @@ -54,7 +54,7 @@ buildPythonPackage rec { numpy opencv3 pillow - scikitimage + scikit-image scipy tensorflow ]; diff --git a/pkgs/development/python-modules/moviepy/default.nix b/pkgs/development/python-modules/moviepy/default.nix index a353816d252e..ab4b97c24552 100644 --- a/pkgs/development/python-modules/moviepy/default.nix +++ b/pkgs/development/python-modules/moviepy/default.nix @@ -12,7 +12,7 @@ # Advanced image processing (triples size of output) , advancedProcessing ? false , opencv3 -, scikitimage +, scikit-image , scikit-learn , scipy , matplotlib @@ -48,7 +48,7 @@ buildPythonPackage rec { proglog ] ++ lib.optionals advancedProcessing [ opencv3 - scikitimage + scikit-image scikit-learn scipy matplotlib diff --git a/pkgs/development/python-modules/napari/default.nix b/pkgs/development/python-modules/napari/default.nix index 0e4199947039..769134bcd4e5 100644 --- a/pkgs/development/python-modules/napari/default.nix +++ b/pkgs/development/python-modules/napari/default.nix @@ -22,7 +22,7 @@ , pillow , pythonOlder , pyyaml -, scikitimage +, scikit-image , scipy , setuptools-scm , sphinx @@ -84,7 +84,7 @@ mkDerivationWith buildPythonPackage rec { pydantic pyopengl pyyaml - scikitimage + scikit-image scipy sphinx superqt diff --git a/pkgs/development/python-modules/ome-zarr/default.nix b/pkgs/development/python-modules/ome-zarr/default.nix index b5be85bf1151..d874935cf544 100644 --- a/pkgs/development/python-modules/ome-zarr/default.nix +++ b/pkgs/development/python-modules/ome-zarr/default.nix @@ -9,7 +9,7 @@ , fsspec , numpy , requests -, scikitimage +, scikit-image , s3fs , toolz , zarr @@ -44,7 +44,7 @@ buildPythonPackage rec { aiohttp requests s3fs - scikitimage + scikit-image toolz ]; diff --git a/pkgs/development/python-modules/pims/default.nix b/pkgs/development/python-modules/pims/default.nix index 531cad0bc069..f92c44b9b033 100644 --- a/pkgs/development/python-modules/pims/default.nix +++ b/pkgs/development/python-modules/pims/default.nix @@ -5,7 +5,7 @@ , numpy , pytestCheckHook , pythonOlder -, scikitimage +, scikit-image , slicerator }: @@ -31,7 +31,7 @@ buildPythonPackage rec { nativeCheckInputs = [ pytestCheckHook - scikitimage + scikit-image ]; pythonImportsCheck = [ diff --git a/pkgs/development/python-modules/psd-tools/default.nix b/pkgs/development/python-modules/psd-tools/default.nix index f0baddf628db..f1ef45d14c36 100644 --- a/pkgs/development/python-modules/psd-tools/default.nix +++ b/pkgs/development/python-modules/psd-tools/default.nix @@ -4,7 +4,7 @@ , pythonOlder , docopt , pillow -, scikitimage +, scikit-image , aggdraw , pytestCheckHook , ipython @@ -34,7 +34,7 @@ buildPythonPackage rec { docopt ipython pillow - scikitimage + scikit-image ]; nativeCheckInputs = [ diff --git a/pkgs/development/python-modules/python-gvm/default.nix b/pkgs/development/python-modules/python-gvm/default.nix index 2311240a7896..ed0f2a57cb53 100644 --- a/pkgs/development/python-modules/python-gvm/default.nix +++ b/pkgs/development/python-modules/python-gvm/default.nix @@ -12,7 +12,7 @@ buildPythonPackage rec { pname = "python-gvm"; - version = "23.4.2"; + version = "23.5.0"; format = "pyproject"; disabled = pythonOlder "3.7"; @@ -21,7 +21,7 @@ buildPythonPackage rec { owner = "greenbone"; repo = pname; rev = "refs/tags/v${version}"; - hash = "sha256-ONCPC05NYyymTKiJZaDTdcShLLy4+K+JwROVVXBkz+o="; + hash = "sha256-84MTr9aTMB5MUj84bqbSGfX8JLA1KQ8pRE8Nr2RmoJw="; }; nativeBuildInputs = [ diff --git a/pkgs/development/python-modules/pyvicare/default.nix b/pkgs/development/python-modules/pyvicare/default.nix index 03b0333daf63..6a116e4c6e71 100644 --- a/pkgs/development/python-modules/pyvicare/default.nix +++ b/pkgs/development/python-modules/pyvicare/default.nix @@ -10,7 +10,7 @@ buildPythonPackage rec { pname = "pyvicare"; - version = "2.27.2"; + version = "2.28.1"; format = "setuptools"; disabled = pythonOlder "3.7"; @@ -19,7 +19,7 @@ buildPythonPackage rec { owner = "somm15"; repo = "PyViCare"; rev = "refs/tags/${version}"; - hash = "sha256-BLvHZRIHj+HysdGcq51Ry3unbT2BQd7lwslAo9n9SdY="; + hash = "sha256-6tyFSKD8Igai9A5wn7vRJdTryy+lv2MkxaskNpCwqV8="; }; SETUPTOOLS_SCM_PRETEND_VERSION = version; diff --git a/pkgs/development/python-modules/pywick/default.nix b/pkgs/development/python-modules/pywick/default.nix index 0596ce02fe2e..5d685d2496e6 100644 --- a/pkgs/development/python-modules/pywick/default.nix +++ b/pkgs/development/python-modules/pywick/default.nix @@ -13,7 +13,7 @@ , pyyaml , scipy , requests -, scikitimage +, scikit-image , six , tabulate , torch @@ -52,7 +52,7 @@ buildPythonPackage rec { pyyaml scipy requests - scikitimage + scikit-image tabulate torch torchvision diff --git a/pkgs/development/python-modules/ray/default.nix b/pkgs/development/python-modules/ray/default.nix index 1a55c4f9e866..711e6bd34f35 100644 --- a/pkgs/development/python-modules/ray/default.nix +++ b/pkgs/development/python-modules/ray/default.nix @@ -43,7 +43,7 @@ , pyyaml , redis , requests -, scikitimage +, scikit-image , scipy , setproctitle , smart-open @@ -103,7 +103,7 @@ buildPythonPackage rec { gym lz4 matplotlib - scikitimage + scikit-image pyyaml scipy ]; diff --git a/pkgs/development/python-modules/slicedimage/default.nix b/pkgs/development/python-modules/slicedimage/default.nix index 76d96346b26e..47e3f58f5817 100644 --- a/pkgs/development/python-modules/slicedimage/default.nix +++ b/pkgs/development/python-modules/slicedimage/default.nix @@ -8,7 +8,7 @@ , pathlib , numpy , requests -, scikitimage +, scikit-image , six , pytestCheckHook , isPy27 @@ -32,7 +32,7 @@ buildPythonPackage rec { packaging numpy requests - scikitimage + scikit-image six tifffile ] ++ lib.optionals isPy27 [ pathlib enum34 ]; diff --git a/pkgs/development/python-modules/stytra/default.nix b/pkgs/development/python-modules/stytra/default.nix index 3817856f01f7..5bc0a4af75e6 100644 --- a/pkgs/development/python-modules/stytra/default.nix +++ b/pkgs/development/python-modules/stytra/default.nix @@ -25,7 +25,7 @@ , pythonOlder , qdarkstyle , qimage2ndarray -, scikitimage +, scikit-image , scipy , tables }: @@ -57,7 +57,7 @@ buildPythonPackage rec { pandas tables git - scikitimage + scikit-image matplotlib qdarkstyle gitpython diff --git a/pkgs/development/python-modules/sunpy/default.nix b/pkgs/development/python-modules/sunpy/default.nix index fc4ccd284689..5d07c631fc58 100644 --- a/pkgs/development/python-modules/sunpy/default.nix +++ b/pkgs/development/python-modules/sunpy/default.nix @@ -21,7 +21,7 @@ , pytest-mock , python-dateutil , pythonOlder -, scikitimage +, scikit-image , scipy , setuptools-scm , sqlalchemy @@ -62,7 +62,7 @@ buildPythonPackage rec { sqlalchemy ]; image = [ - scikitimage + scikit-image scipy ]; net = [ diff --git a/pkgs/development/python-modules/tensorflow-datasets/default.nix b/pkgs/development/python-modules/tensorflow-datasets/default.nix index 13777b7e76a1..e1e19b02660b 100644 --- a/pkgs/development/python-modules/tensorflow-datasets/default.nix +++ b/pkgs/development/python-modules/tensorflow-datasets/default.nix @@ -29,7 +29,7 @@ , pytest-xdist , pytestCheckHook , requests -, scikitimage +, scikit-image , scipy , six , tensorflow @@ -96,7 +96,7 @@ buildPythonPackage rec { pydub pytest-xdist pytestCheckHook - scikitimage + scikit-image scipy tensorflow tifffile diff --git a/pkgs/development/python-modules/torchmetrics/default.nix b/pkgs/development/python-modules/torchmetrics/default.nix index 2fc9ace70c9e..e3d51f7b551f 100644 --- a/pkgs/development/python-modules/torchmetrics/default.nix +++ b/pkgs/development/python-modules/torchmetrics/default.nix @@ -3,7 +3,7 @@ , fetchFromGitHub , cloudpickle , scikit-learn -, scikitimage +, scikit-image , packaging , psutil , py-deprecate @@ -40,7 +40,7 @@ buildPythonPackage { nativeCheckInputs = [ pytorch-lightning scikit-learn - scikitimage + scikit-image cloudpickle psutil pytestCheckHook diff --git a/pkgs/development/python-modules/wandb/default.nix b/pkgs/development/python-modules/wandb/default.nix index 49c2e4827ad5..dde5915652a7 100644 --- a/pkgs/development/python-modules/wandb/default.nix +++ b/pkgs/development/python-modules/wandb/default.nix @@ -29,6 +29,7 @@ , protobuf , psutil , pydantic +, pyfakefs , pytest-mock , pytest-xdist , pytestCheckHook @@ -50,7 +51,7 @@ buildPythonPackage rec { pname = "wandb"; - version = "0.15.0"; + version = "0.15.2"; format = "setuptools"; disabled = pythonOlder "3.6"; @@ -59,7 +60,7 @@ buildPythonPackage rec { owner = pname; repo = pname; rev = "refs/tags/v${version}"; - hash = "sha256-UULsvvk9BsWUrJ8eD7uD2UnUJqmPrmjrJvCA7WRC/Cw="; + hash = "sha256-cAmX3r6XhCBUnC/fNNPakZUNEcDFke0DJMi2PW7sOho="; }; patches = [ @@ -111,6 +112,7 @@ buildPythonPackage rec { pandas parameterized pydantic + pyfakefs pytest-mock pytest-xdist pytestCheckHook @@ -131,6 +133,7 @@ buildPythonPackage rec { disabledTestPaths = [ # Tests that try to get chatty over sockets or spin up servers, not possible in the nix build environment. + "tests/pytest_tests/system_tests/test_notebooks/test_notebooks.py" "tests/pytest_tests/unit_tests_old/test_cli.py" "tests/pytest_tests/unit_tests_old/test_data_types.py" "tests/pytest_tests/unit_tests_old/test_file_stream.py" @@ -156,7 +159,6 @@ buildPythonPackage rec { "tests/pytest_tests/unit_tests_old/tests_launch/test_launch_docker.py" "tests/pytest_tests/unit_tests_old/tests_launch/test_launch_kubernetes.py" "tests/pytest_tests/unit_tests_old/tests_launch/test_launch.py" - "tests/pytest_tests/unit_tests_old/tests_s_nb/test_notebooks.py" "tests/pytest_tests/unit_tests/test_cli.py" "tests/pytest_tests/unit_tests/test_data_types.py" "tests/pytest_tests/unit_tests/test_internal_api.py" @@ -206,9 +208,11 @@ buildPythonPackage rec { "tests/pytest_tests/system_tests/test_importers/test_import_mlflow.py" "tests/pytest_tests/system_tests/test_sweep/test_public_api.py" "tests/pytest_tests/system_tests/test_sweep/test_sweep_scheduler.py" + "tests/pytest_tests/system_tests/test_sweep/test_sweep_utils.py" "tests/pytest_tests/system_tests/test_sweep/test_wandb_agent_full.py" "tests/pytest_tests/system_tests/test_sweep/test_wandb_agent.py" "tests/pytest_tests/system_tests/test_sweep/test_wandb_sweep.py" + "tests/pytest_tests/system_tests/test_system_metrics/test_open_metrics.py" "tests/pytest_tests/system_tests/tests_launch/test_github_reference.py" "tests/pytest_tests/system_tests/tests_launch/test_job.py" "tests/pytest_tests/system_tests/tests_launch/test_launch_add.py" @@ -216,6 +220,7 @@ buildPythonPackage rec { "tests/pytest_tests/system_tests/tests_launch/test_launch_kubernetes.py" "tests/pytest_tests/system_tests/tests_launch/test_launch_local_container.py" "tests/pytest_tests/system_tests/tests_launch/test_launch_run.py" + "tests/pytest_tests/system_tests/tests_launch/test_launch_sweep_cli.py" "tests/pytest_tests/system_tests/tests_launch/test_launch_sweep.py" "tests/pytest_tests/system_tests/tests_launch/test_launch.py" "tests/pytest_tests/system_tests/tests_launch/test_wandb_reference.py" |