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AgeCommit message (Expand)Author
3 daysvarious: Bump Go ports for 1.24.12Adam Weinberger
4 daysMk/Uses/python.mk: Remove USE_PYTHON=cython3{,_run,_test}Po-Chuan Hsieh
4 daysbiology/py-macs2: Change USE_PYTHON from cython to cython0Po-Chuan Hsieh
6 daysbiology/vsearch: Update to 2.30.3Jason W. Bacon
8 daysbiology/sra-tools: Unbreak with extra JDK presentJason W. Bacon
8 daysbiology/sra-tools: pin to java 17Ronald Klop
14 daysbiology/hyphy: fix build on amd64 / i386Piotr Kubaj
2025-12-29biology/cytoscape: pin to openjdk8Ronald Klop
2025-12-28*/*: bump PORTREVISION following devel/sse2neon updateRobert Clausecker
2025-12-20biology/vsearch: Add patch for FreeBSD 16Jason W. Bacon
2025-12-18biology/vsearch: Update to 2.30.2Jason W. Bacon
2025-12-18*: WITH_DEBUG is a user feature not a port oneMathieu Arnold
2025-12-18biology/biostar-tools: Update to 2.1Jason W. Bacon
2025-12-18biology/R-cran-BiocManager: Update to 1.30.27Jason W. Bacon
2025-12-18biology/vcflib: update BUILD_DEPENDS to keep building with zig 0.14Rodrigo Osorio
2025-12-17biology/sra-tools: Update to 3.3.0Jason W. Bacon
2025-12-16lang/rust: Bump revisions after 1.92.0Mikael Urankar
2025-12-16many: Unpin Go portsDag-Erling Smørgrav
2025-12-14biology/iqtree: Update to 3.0.1Joseph Mingrone
2025-12-14biology/hyphy: Update to 2.5.90Joseph Mingrone
2025-12-14biology/hyphy: Update to 2.5.89Joseph Mingrone
2025-12-10biology/psi88: Fix building with FlangGleb Popov
2025-12-07biology/snpeff: Mark BROKEN and set expiration date to 2026-01-31Daniel Engberg
2025-12-07biology/hyphy: Update to 2.5.88Joseph Mingrone
2025-12-03various: Bump Go ports for 1.24.11Adam Weinberger
2025-11-29biology/diamond: Update to 2.1.16 and add test targetJoseph Mingrone
2025-11-25biology/seqkit: update 2.10.1 → 2.11.0Yuri Victorovich
2025-11-12biology/seqkit: update 2.10.0 → 2.10.1Yuri Victorovich
2025-11-11lang/rust: Bump revisions after 1.91.1Mikael Urankar
2025-11-06various: Bump Go ports for 1.24.10Adam Weinberger
2025-11-05biology/diamond: Update to 2.1.15Joseph Mingrone
2025-11-05biology/molden: Take maintainershipYuri Victorovich
2025-11-04biology/spoa: update 4.1.0 → 4.1.5Yuri Victorovich
2025-11-03biology/ncbi-cxx-toolkit: update 29.6.0 → 29.7.0Yuri Victorovich
2025-10-29biology/py-cutadapt: update to 5.2Philippe Audeoud
2025-10-22biology/py-dnaio: Update to 1.2.4Wen Heping
2025-10-22biology/haplohseq: fix build with Boost-1.89 (+)Dima Panov
2025-10-22biology/cufflinks: fix build with Boost-1.89 (+)Dima Panov
2025-10-20devel/boost: bump consumers after boost upgrade (+)Dima Panov
2025-10-14various: Bump go ports for go-1.24.9Adam Weinberger
2025-10-13biology/ncbi-cxx-toolkit: Remove archivers/bzip2 dependencyYuri Victorovich
2025-10-13biology/ncbi-cxx-toolkit: update 29.0.1 → 29.6.0Yuri Victorovich
2025-10-10biology/seqwish: Unbundle sdsl-lite and fix some clang19 compilation errorsYuri Victorovich
2025-10-10devel/sdsl-lite: update 2.1.1-137 → 2.3.1.v.20Yuri Victorovich
2025-10-09biology/viennarna: Unbundle dlib, use port dependency insteadYuri Victorovich
2025-10-07many: Bump dependent ports after go124 updateAdam Weinberger
2025-10-05biology/vsearch: Update to 2.30.1Jason W. Bacon
2025-10-03lang/rust: Bump revisions after 1.90.0Mikael Urankar
2025-09-15*/*: switch dependency from devel/py-lxml5 to devel/py-lxmlHiroki Tagato
2025-09-10biology/diamond: Update to 2.1.14Joseph Mingrone
generated by cgit v1.2.3 (git 2.25.1) at 2026-01-19 09:42:03 +0000